4 lines
4.3 KiB
JavaScript
4 lines
4.3 KiB
JavaScript
var nextflow_tmLanguage = {$schema:"https://raw.githubusercontent.com/martinring/tmlanguage/master/tmlanguage.json",name:"nextflow",scopeName:"source.nextflow",keyEquivalent:"^~N",patterns:[{include:"#nfl-rules"}],repository:{"nfl-rules":{patterns:[{include:"#process-def"},{include:"#workflow-def"},{include:"#code-block"},{include:"#include-statement"},{include:"#implicit-variables"},{comment:"method call and parens",begin:"(\\w*\\()",beginCaptures:{"1":{patterns:[{include:"source.nextflow-groovy"}]}},end:"\\)",patterns:[{include:"#nfl-rules"}]},{comment:"braces",begin:"{",end:"}",patterns:[{include:"#nfl-rules"}]},{include:"source.nextflow-groovy"}]},"process-def":{name:"process.nextflow",begin:"^\\s*(process)\\s+(\\w+|\"[^\"]+\"|'[^']+')\\s*{",beginCaptures:{"1":{name:"keyword.nextflow"},"2":{name:"function.nextflow"}},end:"}",patterns:[{include:"#process-body"}]},"process-body":{patterns:[{name:"entity.name.function.nextflow",match:"(?:accelerator|afterScript|beforeScript|cache|cpus|conda|container|containerOptions|clusterOptions|debug|disk|echo|errorStrategy|executor|ext|label|machineType|maxErrors|maxForks|maxRetries|memory|module|penv|pod|publishDir|queue|resourceLabels|scratch|stageInMode|stageOutMode|storeDir|tag|time)\\b"},{name:"constant.block.nextflow",match:"(?:input|output|when|script|shell|exec):"},{name:"entity.name.function.nextflow",match:"\\b(tuple|set|path|file|val|stdout)(\\(|\\s)"},{include:"#implicit-variables"},{comment:"method call and parens",begin:"(\\w*\\()",beginCaptures:{"1":{patterns:[{include:"source.nextflow-groovy"}]}},end:"\\)",patterns:[{include:"#process-body"}]},{comment:"braces",begin:"{",end:"}",patterns:[{include:"#process-body"}]},{include:"source.nextflow-groovy#comments"},{include:"source.nextflow-groovy#support-functions"},{include:"source.nextflow-groovy#keyword"},{include:"source.nextflow-groovy#values"},{include:"source.nextflow-groovy#anonymous-classes-and-new"},{include:"source.nextflow-groovy#types"},{include:"source.nextflow-groovy#parens"},{include:"source.nextflow-groovy#closures"},{include:"source.nextflow-groovy#braces"}]},"workflow-def":{name:"workflow.nextflow",begin:"^\\s*(workflow)(?:\\s+(\\w+|\"[^\"]+\"|'[^']+'))?\\s*{",beginCaptures:{"1":{name:"keyword.nextflow"},"2":{name:"constant.nextflow"}},end:"}",patterns:[{include:"#workflow-body"}]},"workflow-body":{patterns:[{include:"#implicit-variables"},{name:"constant.block.nextflow",match:"(?:take|main|emit):"},{name:"entity.name.function.nextflow",match:"(?<=[\\s\\.])(branch|buffer|close|collate|collect|collectFile|combine|concat|count|countBy|cross|distinct|dump|filter|first|flatMap|flatten|groupTuple|ifEmpty|join|last|map|max|merge|min|mix|multiMap|randomSample|reduce|set|splitCsv|splitFasta|splitFastq|splitText|sum|take|tap|toInteger|toList|toSortedList|transpose|unique|until|view)(?=[{\\(\\s])"},{comment:"Channel factory single line",match:"\\b((?:C|c)hannel\\.)((fromList|fromPath|fromFilePairs|fromSRA|from|of|empty|value|watchPath)\\W)?",captures:{"1":{name:"keyword.nextflow"},"2":{name:"entity.name.function.nextflow"}}},{comment:"Channel factory multi-line",begin:"\\b((?:C|c)hannel)\\s*$",beginCaptures:{"1":{name:"keyword.nextflow"}},end:"(^\\s*)(?:(\\.)(fromList|fromPath|fromFilePairs|fromSRA|from|of|empty|value|watchPath)\\W)?",endCaptures:{"1":{name:"keyword.nextflow"},"2":{name:"keyword.nextflow"},"3":{name:"entity.name.function.nextflow"}}},{comment:"method call and parens",begin:"(\\w*\\()",beginCaptures:{"1":{patterns:[{include:"source.nextflow-groovy"}]}},end:"\\)",patterns:[{include:"#workflow-body"}]},{comment:"braces",begin:"{",end:"}",patterns:[{include:"#workflow-body"}]},{include:"source.nextflow-groovy#comments"},{include:"source.nextflow-groovy#support-functions"},{include:"source.nextflow-groovy#keyword"},{include:"source.nextflow-groovy#values"},{include:"source.nextflow-groovy#anonymous-classes-and-new"},{include:"source.nextflow-groovy#types"},{include:"source.nextflow-groovy#parens"},{include:"source.nextflow-groovy#closures"},{include:"source.nextflow-groovy#braces"}]},"include-statement":{patterns:[{match:"^\\b(include)\\b",name:"keyword.nextflow"},{match:"\\b(from)\\b",name:"keyword.nextflow"}]},"implicit-variables":{patterns:[{match:"(?<=[^\\.\\w]|^)(params|nextflow|workflow|launchDir|moduleDir|projectDir|workDir)\\b",name:"variable.language.nextflow"}]}}};
|
|
|
|
export { nextflow_tmLanguage as default };
|